TNMplot: differential gene expression analysis in Tumor, Normal, and Metastatic tissues.


The pan-cancer analysis page displays the expression range for a selected gene across all tissues in all available normal and tumor RNA Seq data.

Siginificant differences by Mann-Whitney U test are marked with red*

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Database setup:
TNMplot includes 56,938 unique samples:
from GEO, GTex, TCGA, and TARGET databases.
This includes 15,648 normal, 40,442 tumor, and 848 metastasis samples.
By using the services, you agree to be bound by the Terms of Use
Gene summary:
Please kindly cite our paper:
A. Bartha, B. Gyorffy, TNMplot.com: A Web Tool for the Comparison of Gene Expression in Normal, Tumor and Metastatic Tissues Int. J. Mol. Sci. 2021, 22(5), 2622.

Copyright ©: TNMplot.com, 2021-2023
Check our other webtools: http://www.kmplot.com ; http://www.rocplot.com ; http://www.mutarget.com ; https://www.multipletesting.com/

The pan-cancer heatmap analysis page displays log2 FC values of tumor/normal RNA-Seq data, red color represents higher expression in tumor, while the blue color indicates higher expression in normal tissues. The sizes of the circles are inversely proportional to the adjusted P values.

Please select at least 2 genes, the maximal number of genes allowed simultaneously is is 100. To paste multiple gene names please use capital names separated with space (e.g.: TOP2A MKI67 PIK3CA).

















Overview of the plotting tools available in the new TNM plotter

Pan-cancer


Pan-cancer box plot


Gene expression comparison


Compare Tumor and Normal


Correlation analysis


Gene vs gene correlation


Functional analysis


Gene Ontology analysis



Pan-cancer heatmap



Compare Tumor,Normal and Metastasis



Gene vs all genes correlation



GO for differentially expressed genes




Multi-gene analysis



Correlation matrix analysis



KEGG analysis






Academic researchers: provided that the original publications are properly cited, the use of www.tnmplot.com is free for scientific projects. Please see below the complete Terms of Use.

Commercial entities: the terms of use you have licensed apply to you. Please contact us at gyorffy@kmplot.com to obtain a license.

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TERMS OF USE

Last updated June 1, 2023

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